Heatmap of a property related to grid type patterns (wellplate) where x, y axes are mapped into columns and rows.
Tracking results with fixed number of tracks and time points can color code speed or other track properties at given time.
This graph is used for visualizing Y of ordinal X. Settings of the graph are organized into 6 main tabs, Settings of each tab are described below:
General
Sets the title of the graph shown in the top.
Defines grouping and nesting. Group labels and column titles can be turned on/off.
Specifies whether the X and Y data labels are shown.
Determines the visibility and the position of the graph legend.
Data
This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes. To move the variable from the axis list back to the All Columns list, click
or
to remove all. With a variable selected in the X/Y Axis list, Series style such as color and values. Error bar section sets the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its color, line width, and whisker width.
Interaction
Defines graph name in the layouts.
Defines graph icon in the layouts.
Limits the graph data from accumulated table to a single frame.
Enables the interactive column selection in the graph top bar.
Scales graph by all data in the accumulated table.
Enables the interactive data selection in the graph scene.
Adds interactive tools to the graph side bar.
Axes
Defines the visibility and text of the axis label.
Defines the format and display precision of the tick labels.
In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.
In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.
Specifies the scale type - linear or logarithmic.
Reverses the values range from “min - max” to “max -min”.
In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.
In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.
Provides a graphical representation of data where the individual values contained in a two-dimensional matrix are represented as colors from selected color gradient map. This graph does not support a grouped source table.
Settings of the graph are organized into 6 main tabs, Settings of each tab are described below:
General
Sets the title of the graph shown in the top.
Defines the used palette and default color for missing values.
Specifies whether the labels are shown.
Data
Select default columns and enable interactive change in the graph top bar.
Select which columns can be selected in graph top bar for each axis.
Interaction
Defines the graph name in layouts.
Defines the graph icon in layouts.
Limits the graph data from the accumulated table to a single frame.
Scales graph by all data in the accumulated table.
Enables interactive data selection in the graph scene.
Adds an interactive tools to the graph side bar.
Axes
Defines the visibility and text of the axis label.
Defines the format and display precision of the tick labels.
This graph is used for visualizing fitted curve.
Settings of the graph are organized into three main tabs. Settings of each tab are described below:
General
Sets the title of the graph shown in the top.
Determines the visibility and the position of the graph legend.
Data
This tab is used for selecting fitted equations to plot. Select a data variable and click on the arrow to assign it to Displayed Columns. Multiple variables can be assigned. To move the variable from the Displayed list back to the Columns with Fitted Equation list, click or
to remove all.
Interaction
Defines the graph name in the layouts.
Defines the graph icon in the layouts.
Limits graph data from the accumulated table to a single frame.
Enables interactive data selection in the graph scene.
Adds interactive tools to the graph side bar.
This graph is used for visualizing distribution of data. Settings of the graph are organized into three main tabs. Settings of each tab are described below:
General
Sets the title of the graph shown in the top.
For numerical values set the bin count, eventually you can set minimum and maximum. For string values enter the list used as a filter.
Data
This tab is used to select data to plot. Select a data variable and click on the arrow to assign it to Displayed Columns. Multiple variables can be assigned. To move the variable from the Displayed list back to the Columns with Fitted Equation list, click or
to remove all.
Interaction
Defines the graph name in the layouts.
Defines the graph icon in the layouts.
Limits graph data from the accumulated table to a single frame.
Enables interactive data selection in the graph scene.
Adds interactive tools to the graph side bar.
This graph is used for visualizing Y as function of X.
Settings of the graph are organized into 6 main tabs. Settings of each tab are described below:
General
Sets the title of the graph shown in the top.
Defines palettes and markers and grouped source table behaviour.
Specifies whether the X and Y data labels are shown.
Determines the visibility and the position of the graph legend.
Data
This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes. To move move the variable from the axis list back to the All Columns list, click or
to remove all.
With a variable selected in the X/Y Axis list, Series style such as color and values. Error bar section sets the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its color, line width, and whisker width.
Interaction
Defines the graph name in the layouts.
Defines the graph icon in the layouts.
Limits graph data from the accumulated table to a single frame.
Enables interactive column selection in the graph top bar.
Scales graph by all data in the accumulated table.
Enables interactive data selection in the graph scene.
Adds interactive tools to the graph side bar.
Axes
Defines the visibility and text of the axis label.
Defines the format and display precision of the tick labels.
In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.
In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.
Specifies the scale type - linear or logarithmic.
Reverses the values range from “min - max” to “max -min”.
In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.
In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.
This graph is used for visualizing a cloud of points. Settings of the graph are organized into six main tabs. Settings of each tab are described below:
General
Sets the title of the graph shown in the top.
Defines palettes and markers and grouped source table behaviour.
Specifies whether the X and Y data labels are shown.
Determines the visibility and the position of the graph legend.
Data
This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes. To move move the variable from the axis list back to the All Columns list, click or
to remove all.
With a variable selected in the X/Y Axis list, Series style such as color and values. Error bar section sets the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its color, line width, and whisker width.
Interaction
Defines the graph name in the layouts.
Defines the graph icon in the layouts.
Limits graph data from the accumulated table to a single frame.
Enables interactive column selection in the graph top bar.
Scales graph by all data in the accumulated table.
Enables interactive data selection in the graph scene.
Adds interactive tools to the graph side bar.
Axes
Defines the visibility and text of the axis label.
Defines the format and display precision of the tick labels.
In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.
In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.
Specifies the scale type - linear or logarithmic.
Reverses the values range from “min - max” to “max -min”.
In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.
In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.
This graph is used for visualizing a cloud of points. Points can also differentiate by size and color.
Settings of the graph are organized into six main tabs. Settings of each tab are described below:
General
Sets the title of the graph shown in the top.
Defines palettes and markers and grouped source table behaviour.
Specifies whether the X and Y data labels are shown.
Determines the visibility and the position of the graph legend.
Data
Select default columns and enable interactive change in graph top bar.
Choose which columns can be selected in graph top bar for each axis.
Interaction
Defines the graph name in the layouts.
Defines the graph icon in the layouts.
Limits graph data from the accumulated table to a single frame.
Scales graph by all data in the accumulated table.
Enables interactive data selection in the graph scene.
Adds interactive tools to the graph side bar.
Axes
Defines the visibility and text of the axis label.
Defines the format and display precision of the tick labels.
In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.
In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.
Specifies the scale type - linear or logarithmic.
Reverses the values range from “min - max” to “max -min”.
In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.
In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.
Specifies which results are displayed in the Main panel - View > Analysis Controls > GA3 Results - Main (Left, Right inputs), Side panel - View > Analysis Controls > GA3 Results - Side
(Side input) or Report panel (Report input).
Organizes input result panes or layouts side-by-side horizontally.
Displays well plate with one or more bars in each well. Any numerical column aggregated per well is suitable as input.
Table
Data filtered per frame or whole table.
Displays title above the well plate.
Name of the pane visible on tool tip over the icon.
Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).
Data
Enables the user to select the data columns.
Selects the features for bars.
Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.
Hidden columns to force not visible. The text is regular pattern that must match. Use “*” to select all columns in conjunction with show.
Overrides the overall minimum.
Overrides the overall maximum.
Displays the bars in a logarithmic scale.
Displays well plate with bars stacked one over the other in each well. Any numerical column aggregated per well is suitable as input.
Table
Data filtered per frame or whole table.
Displays title above the well plate.
Name of the pane visible on tool tip over the icon.
Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).
Data
Enables the user to select the data columns.
Selects the features for bars.
Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.
Hidden columns to force not visible. The text is regular pattern that must match. Use “*” to select all columns in conjunction with show.
Overrides the overall minimum.
Overrides the overall maximum.
Displays the bars in a logarithmic scale.
Displays the well plate with a box plot in each well. Any box plot aggregated column per well is suitable as input.
Table
Data filtered per frame or whole table.
Displays title above the well plate.
Name of the pane visible on tool tip over the icon.
Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).
Data
Enables the user to select the data columns.
Selects the features for the box plot.
Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.
Hidden columns to force not visible. The text is regular pattern that must match. Use “*” to select all columns in conjunction with show.
Overrides the overall minimum.
Overrides the overall maximum.
Displays the well plate with dosing information: concentrations and positive/negative controls. It uses concentration, compound, group and control columns from a table typically produced by the Measurement > Metadata > Wellplate node.
Table
Data filtered per frame or whole table.
Displays title above the well plate.
Name of the pane visible on tool tip over the icon.
Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).
Data
Enables the user to show and hide text labels in wells.
Displays the texts inside wells.
Displays the well plate heat map. Any numerical aggregated column per well is suitable as input.
Table
Data filtered per frame or whole table.
Displays title above the well plate.
Name of the pane visible on tool tip over the icon.
Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).
Data
Enables the user to select the data columns.
Selects the features for heatmap.
Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.
Hidden columns to force not visible. The text is regular pattern that must match. Use “*” to select all columns in conjunction with show.
Overrides the overall minimum.
Overrides the overall maximum.
Shows color in a logarithmic scale.
Enables the user to show and hide text labels in wells.
Displays the texts inside wells.
Displays the well plate with image and optionally binary overlay thumbnails. Any image thumbnail column is suitable. The thumbnail is typically produced by the Measurement > Metadata > Wellplate node.
Table
Data filtered per frame or whole table.
Displays title above the well plate.
Name of the pane visible on tool tip over the icon.
Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).
Data > Color channels
Enables the user to select individual channel or All channels.
Data > Binary Layers
Enables the user to select individual binary layers.
Displays the well plate with labeling information: positive/negative controls, detection and custom labels. Uses detection and labeling columns from a table typically produced by the Measurement > Metadata > Wellplate node.
Table
Data filtered per frame or whole table.
Displays title above the well plate.
Name of the pane visible on tool tip over the icon.
Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).
Data
Enables the user to select which labels to display (all if unchecked).
Enables the user to show and hide text labels in wells.
Displays the texts inside wells.
Displays the well plate with violin plot in each well. Any violin aggregated column per well is suitable as input.
Table
Data filtered per frame or whole table.
Displays title above the well plate.
Name of the pane visible on tool tip over the icon.
Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).
Data
Enables the user to select the data column.
Selects the feature for the violin plot.
Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.
Hidden columns to force not visible. The text is regular pattern that must match. Use “*” to select all columns in conjunction with show.
Table view for showing summary information in the form of two columns: header and value. The input to the summary table is a table which gets transposed in such a way that the column names become header and the first row values become values.
Table
Data filtered per frame or whole table.
Name of the pane visible on tool tip over the icon.
Rows
Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.
Hidden columns to force not visible. The text is regular pattern that must match. Use “*” to select all columns in conjunction with show.
Sections define the first rows of sections. Section is separated visually by an extra space.
Header suffix for all headers (e.g. “:”).
Table view for showing the data. Table columns can be resized, sorted, moved, filtered if enabled in the node. Statistics can be enabled as well.
Table
Data filtered per frame or whole table.
Name of the pane visible on tool tip over the icon.
Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).
Columns
Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.
Hidden columns to force not visible. The text is regular pattern that must match. Use “*” to select all columns in conjunction with show.
Show row index column in front of each row.
Enable sorting on all columns.
Enable resizing on all columns.
Enable moving on all columns.
Enable filtering on all columns.
Statistics
Selects the statistics rows to be calculated.
Enables the user to show and hide the statistics rows.
Defines if statistics rows are visible or not.
Puts the connected results into a report which is defined in this node and shown in the Analysis Results tab. For details about defining the report, please see Report Editing.
This graph is used for visualizing Y of ordinal X. Settings of each tab are described below.
General
Sets the title of the graph shown in the top.
Sets the inside color of the graph (color behind the visualized data).
Sets the outside color of the graph (frame around the visualized data).
Returns the colors to the default dark scheme.
Sets the color of the axes.
Sets the color of the texts.
Returns the colors to the default light scheme.
Sets the color scheme for the grouped data.
Shows data values directly in the graph.
Hides the legend.
Shows the legend inside the graph. Choose the legend position in the drop-down menu next to this option.
Shows the legend below the graph.
Sets the background color of the legend.
Sets the color of the legend text.
Data
This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes.
button opens the Data Series dialog setting up the data series graph properties such as the color, line type, stroke type, line width, fill, marker type, and values type. Only the checked properties are visualized in the graph.
button opens the Error Bar dialog setting up the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its color, line width, and whisker width.
butons move the variable in the axis list up/down.
button moves the variable from the axis list back to the All Columns list.
X Axis/Y Axis/Left Y Axis/Right Y Axis/Color Axis/Size Axis/Category Axis
Sets the title of the axis that is currently being set.
Reverses the range of the category axis.
Shows/hides the labels for the axis currently being set.
Specifies the axis label format for the axis currently being set.
Specifies the axis label numeral precision.
Specifies the step size of the category axis.
In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box. Scale specifies the scale type - linear or logarithmic.
In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box. Reversed Range reverses the values range from “min - max” to “max -min”.
In Auto mode, the major step value for the ticks and gridlines is set automatically. If switched to Fixed, a major step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Grid color specifies the color of the grid line.
In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Grid color specifies the color of the grid line.
Provides a graphical representation of data where the individual values contained in a two-dimensional matrix are represented as colors from selected color gradient map. This graph does not support grouped source table A.
All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.
Typical Usecases
This graph is used for visualizing Y as function of X.
All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.
This graph is used for visualizing a cloud of points. If the source table A is grouped the graph shows them in colors.
All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.
This 3D graph is used for visualizing a cloud of points. The third axis is visualized using a color gradient. This graph does not support grouped source table A.
All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.
This 3D graph is used for visualizing a cloud of points. The third axis is visualized using disks of different size. This graph does not support grouped source table A.
All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.
Depicts groups of numerical data through their quartiles as a box plot. It shows minimum, first quartile, mean, third quartile and maximum. It can optionally show outliers. If the source table A is grouped the graph shows one box for each group.
All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.