Results & Graphs

Results & Graphs > Graphs > Barchart

This graph is used for visualizing Y of ordinal X. Settings of the graph are organized into 6 main tabs, Settings of each tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Categorical Factors

Defines grouping and nesting. Group labels and column titles can be turned on/off.

Annotations

Specifies whether the X and Y data labels are shown.

Legend

Determines the visibility and the position of the graph legend.

Data

All Columns

This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes. To move the variable from the axis list back to the All Columns list, click or to remove all. With a variable selected in the X/Y Axis list, Series style such as color and values. Error bar section sets the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its color, line width, and whisker width.

Interaction

Name

Defines graph name in the layouts.

Icon

Defines graph icon in the layouts.

Display

Limits the graph data from accumulated table to a single frame.

Column Selection

Enables the interactive column selection in the graph top bar.

Autoscale

Scales graph by all data in the accumulated table.

Data selection

Enables the interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.

Scale

Specifies the scale type - linear or logarithmic.

Reversed Range

Reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.

Results & Graphs > Graphs > Colormap

Provides a graphical representation of data where the individual values contained in a two-dimensional matrix are represented as colors from selected color gradient map. This graph does not support a grouped source table.

Settings of the graph are organized into 6 main tabs, Settings of each tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Colors

Defines the used palette and default color for missing values.

Annotations

Specifies whether the labels are shown.

Data

X Axis, YAxis, Color

Select default columns and enable interactive change in the graph top bar.

Column selection

Select which columns can be selected in graph top bar for each axis.

Interaction

Name

Defines the graph name in layouts.

Icon

Defines the graph icon in layouts.

Display

Limits the graph data from the accumulated table to a single frame.

Autoscale

Scales graph by all data in the accumulated table.

Data selection

Enables interactive data selection in the graph scene.

Tools

Adds an interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Results & Graphs > Graphs > Fitplot

This graph is used for visualizing fitted curve.

Settings of the graph are organized into three main tabs. Settings of each tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Legend

Determines the visibility and the position of the graph legend.

Data

Columns with Fitted Equation

This tab is used for selecting fitted equations to plot. Select a data variable and click on the arrow to assign it to Displayed Columns. Multiple variables can be assigned. To move the variable from the Displayed list back to the Columns with Fitted Equation list, click or to remove all.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display

Limits graph data from the accumulated table to a single frame.

Data selection

Enables interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Results & Graphs > Graphs > Histogram

This graph is used for visualizing distribution of data. Settings of the graph are organized into three main tabs. Settings of each tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Bins

For numerical values set the bin count, eventually you can set minimum and maximum. For string values enter the list used as a filter.

Data

All Columns

This tab is used to select data to plot. Select a data variable and click on the arrow to assign it to Displayed Columns. Multiple variables can be assigned. To move the variable from the Displayed list back to the Columns with Fitted Equation list, click or to remove all.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display

Limits graph data from the accumulated table to a single frame.

Data selection

Enables interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Results & Graphs > Graphs > Linechart

This graph is used for visualizing Y as function of X.

Settings of the graph are organized into 6 main tabs. Settings of each tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Palettes & Markers

Defines palettes and markers and grouped source table behaviour.

Annotations

Specifies whether the X and Y data labels are shown.

Legend

Determines the visibility and the position of the graph legend.

Data

All Columns

This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes. To move move the variable from the axis list back to the All Columns list, click or to remove all.

With a variable selected in the X/Y Axis list, Series style such as color and values. Error bar section sets the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its color, line width, and whisker width.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display

Limits graph data from the accumulated table to a single frame.

Column selection

Enables interactive column selection in the graph top bar.

Autoscale

Scales graph by all data in the accumulated table.

Data selection

Enables interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.

Scale

Specifies the scale type - linear or logarithmic.

Reversed Range

Reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.

Results & Graphs > Graphs > Scatterplot

This graph is used for visualizing a cloud of points. Settings of the graph are organized into six main tabs. Settings of each tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Palettes & Markers

Defines palettes and markers and grouped source table behaviour.

Annotations

Specifies whether the X and Y data labels are shown.

Legend

Determines the visibility and the position of the graph legend.

Data

All Columns

This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes. To move move the variable from the axis list back to the All Columns list, click or to remove all.

With a variable selected in the X/Y Axis list, Series style such as color and values. Error bar section sets the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its color, line width, and whisker width.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display

Limits graph data from the accumulated table to a single frame.

Column selection

Enables interactive column selection in the graph top bar.

Autoscale

Scales graph by all data in the accumulated table.

Data selection

Enables interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.

Scale

Specifies the scale type - linear or logarithmic.

Reversed Range

Reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.

Results & Graphs > Graphs > Scatterplot 4D

This graph is used for visualizing a cloud of points. Points can also differentiate by size and color.

Settings of the graph are organized into six main tabs. Settings of each tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Palettes & Markers

Defines palettes and markers and grouped source table behaviour.

Annotations

Specifies whether the X and Y data labels are shown.

Legend

Determines the visibility and the position of the graph legend.

Data

X Axis, Y Axis, Color, Size

Select default columns and enable interactive change in graph top bar.

Column selection

Choose which columns can be selected in graph top bar for each axis.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display

Limits graph data from the accumulated table to a single frame.

Autoscale

Scales graph by all data in the accumulated table.

Data selection

Enables interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.

Scale

Specifies the scale type - linear or logarithmic.

Reversed Range

Reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.

Results & Graphs > Layout > Display

Specifies which results are displayed in the Main panel - View > Analysis Controls > GA3 Results - Main (Left, Right inputs), Side panel - View > Analysis Controls > GA3 Results - Side (Side input) or Report panel (Report input).

Results & Graphs > Layout > Horizontal

Organizes input result panes or layouts side-by-side horizontally.

Results & Graphs > Layout > Stacked

Organizes input result panes one over the other.

Results & Graphs > Wellplate > Bars

Displays well plate with one or more bars in each well. Any numerical column aggregated per well is suitable as input.

Table

Data

Data filtered per frame or whole table.

Title

Displays title above the well plate.

Name

Name of the pane visible on tool tip over the icon.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).

Data

Selection visible

Enables the user to select the data columns.

Selected columns

Selects the features for bars.

Show columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Minimum

Overrides the overall minimum.

Maximum

Overrides the overall maximum.

Log Y

Displays the bars in a logarithmic scale.

Results & Graphs > Wellplate > Barstack

Displays well plate with bars stacked one over the other in each well. Any numerical column aggregated per well is suitable as input.

Table

Data

Data filtered per frame or whole table.

Title

Displays title above the well plate.

Name

Name of the pane visible on tool tip over the icon.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).

Data

Selection visible

Enables the user to select the data columns.

Selected columns

Selects the features for bars.

Show columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Minimum

Overrides the overall minimum.

Maximum

Overrides the overall maximum.

Log Y

Displays the bars in a logarithmic scale.

Results & Graphs > Wellplate > Boxplot

Displays the well plate with a box plot in each well. Any box plot aggregated column per well is suitable as input.

Table

Data

Data filtered per frame or whole table.

Title

Displays title above the well plate.

Name

Name of the pane visible on tool tip over the icon.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).

Data

Selection visible

Enables the user to select the data columns.

Selected columns

Selects the features for the box plot.

Show columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Minimum

Overrides the overall minimum.

Maximum

Overrides the overall maximum.

Results & Graphs > Wellplate > Dosing

Displays the well plate with dosing information: concentrations and positive/negative controls. It uses concentration, compound, group and control columns from a table typically produced by the Measurement > Metadata > Wellplate node.

Table

Data

Data filtered per frame or whole table.

Title

Displays title above the well plate.

Name

Name of the pane visible on tool tip over the icon.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).

Data

Text in well visible

Enables the user to show and hide text labels in wells.

Show text in wells

Displays the texts inside wells.

Results & Graphs > Wellplate > Heatmap

Displays the well plate heat map. Any numerical aggregated column per well is suitable as input.

Table

Data

Data filtered per frame or whole table.

Title

Displays title above the well plate.

Name

Name of the pane visible on tool tip over the icon.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).

Data

Selection visible

Enables the user to select the data columns.

Selected columns

Selects the features for heatmap.

Show columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Minimum

Overrides the overall minimum.

Maximum

Overrides the overall maximum.

Log colors

Shows color in a logarithmic scale.

Text in well visible

Enables the user to show and hide text labels in wells.

Show text in wells

Displays the texts inside wells.

Results & Graphs > Wellplate > Image

Displays the well plate with image and optionally binary overlay thumbnails. Any image thumbnail column is suitable. The thumbnail is typically produced by the Measurement > Metadata > Wellplate node.

Table

Data

Data filtered per frame or whole table.

Title

Displays title above the well plate.

Name

Name of the pane visible on tool tip over the icon.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).

Data > Color channels

Selection visible

Enables the user to select individual channel or All channels.

Data > Binary Layers

Selection visible

Enables the user to select individual binary layers.

Results & Graphs > Wellplate > Labeling

Displays the well plate with labeling information: positive/negative controls, detection and custom labels. Uses detection and labeling columns from a table typically produced by the Measurement > Metadata > Wellplate node.

Table

Data

Data filtered per frame or whole table.

Title

Displays title above the well plate.

Name

Name of the pane visible on tool tip over the icon.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).

Data

Selection visible

Enables the user to select which labels to display (all if unchecked).

Text in well visible

Enables the user to show and hide text labels in wells.

Show text in wells

Displays the texts inside wells.

Results & Graphs > Wellplate > Violin

Displays the well plate with violin plot in each well. Any violin aggregated column per well is suitable as input.

Table

Data

Data filtered per frame or whole table.

Title

Displays title above the well plate.

Name

Name of the pane visible on tool tip over the icon.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).

Data

Selection visible

Enables the user to select the data column.

Selected column

Selects the feature for the violin plot.

Show columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Results & Graphs > Tables > Summary

Table view for showing summary information in the form of two columns: header and value. The input to the summary table is a table which gets transposed in such a way that the column names become header and the first row values become values.

Table

Data

Data filtered per frame or whole table.

Name

Name of the pane visible on tool tip over the icon.

Rows

Shown columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Sections

Sections define the first rows of sections. Section is separated visually by an extra space.

Header suffix

Header suffix for all headers (e.g. :).

Results & Graphs > Tables > Table

Table view for showing the data. Table columns can be resized, sorted, moved, filtered if enabled in the node. Statistics can be enabled as well.

Table

Data

Data filtered per frame or whole table.

Name

Name of the pane visible on tool tip over the icon.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to relevant frame).

Columns

Shown columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Show row index column

Show row index column in front of each row.

Enable sorting

Enable sorting on all columns.

Enable resizing

Enable resizing on all columns.

Enable moving

Enable moving on all columns.

Enable filtering

Enable filtering on all columns.

Statistics

Statistics

Selects the statistics rows to be calculated.

Statistics button visible

Enables the user to show and hide the statistics rows.

Show Statistics

Defines if statistics rows are visible or not.

Results & Graphs > Reports > Report

Puts the connected results into a report which is defined in this node and shown in the Analysis Results tab. For details about defining the report, please see Report Editing.

Results & Graphs > Legacy Graphs > Barchart

This graph is used for visualizing Y of ordinal X. Settings of each tab are described below.

General

Title

Sets the title of the graph shown in the top.

Inside

Sets the inside color of the graph (color behind the visualized data).

Outside

Sets the outside color of the graph (frame around the visualized data).

Default Dark

Returns the colors to the default dark scheme.

Axes

Sets the color of the axes.

Text

Sets the color of the texts.

Default Light

Returns the colors to the default light scheme.

Series

Sets the color scheme for the grouped data.

Display Values

Shows data values directly in the graph.

Hidden

Hides the legend.

Inside Graph

Shows the legend inside the graph. Choose the legend position in the drop-down menu next to this option.

Below Graph

Shows the legend below the graph.

Background

Sets the background color of the legend.

Text

Sets the color of the legend text.

Data

All Columns

This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes.

button opens the Data Series dialog setting up the data series graph properties such as the color, line type, stroke type, line width, fill, marker type, and values type. Only the checked properties are visualized in the graph.

button opens the Error Bar dialog setting up the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its color, line width, and whisker width.

butons move the variable in the axis list up/down.

button moves the variable from the axis list back to the All Columns list.

X Axis/Y Axis/Left Y Axis/Right Y Axis/Color Axis/Size Axis/Category Axis

Title

Sets the title of the axis that is currently being set.

Reverse Range

Reverses the range of the category axis.

Visible

Shows/hides the labels for the axis currently being set.

Format

Specifies the axis label format for the axis currently being set.

Precision

Specifies the axis label numeral precision.

Step

Specifies the step size of the category axis.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box. Scale specifies the scale type - linear or logarithmic.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box. Reversed Range reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and gridlines is set automatically. If switched to Fixed, a major step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Grid color specifies the color of the grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Grid color specifies the color of the grid line.

Results & Graphs > Legacy Graphs > Colormap

Provides a graphical representation of data where the individual values contained in a two-dimensional matrix are represented as colors from selected color gradient map. This graph does not support grouped source table A.

All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.

Typical Usecases

  • Heatmap of a property related to grid type patterns (wellplate) where x, y axes are mapped into columns and rows.

  • Tracking results with fixed number of tracks and time points can color code speed or other track properties at given time.

Results & Graphs > Legacy Graphs > Linechart

This graph is used for visualizing Y as function of X.

All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.

Results & Graphs > Legacy Graphs > Scatterplot

This graph is used for visualizing a cloud of points. If the source table A is grouped the graph shows them in colors.

All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.

Results & Graphs > Legacy Graphs > Scatterplot XY Color

This 3D graph is used for visualizing a cloud of points. The third axis is visualized using a color gradient. This graph does not support grouped source table A.

All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.

Results & Graphs > Legacy Graphs > Scatterplot XY Size

This 3D graph is used for visualizing a cloud of points. The third axis is visualized using disks of different size. This graph does not support grouped source table A.

All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.

Results & Graphs > Legacy Graphs > Statistical Box

Depicts groups of numerical data through their quartiles as a box plot. It shows minimum, first quartile, mean, third quartile and maximum. It can optionally show outliers. If the source table A is grouped the graph shows one box for each group.

All tabs are closely described in the Results & Graphs > Legacy Graphs > Barchart node.