Results & Graphs

Results & Graphs > Graphs > Barchart

This graph is used for visualizing Y of ordinal X. Settings of each tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Categorical Factors

Nesting specifies the order in which the columns are to be arranged (e.g. if all bars for column A and then all bars for column B, or if the bars for the columns should alternate, ...). Group labels and column titles can be turned on/off. Grouped records specifies how the bars are colored - by column or grouping. Padding specifies how much to separate the groups given by nesting.

Annotations

Specifies whether the X and Y data labels are shown.

Legend

Determines the visibility and the position of the graph legend.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

All Columns

This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes. To move the variable from the axis list back to the All Columns list, click or to remove all. With a variable selected in the X/Y Axis list, Series style such as color and values. Error Bar section sets the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its Color, Line width, and Whisker width.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Autoscale

Scales graph by all data in the accumulated table.

Show button

Adds the Scale to fit the data button to the top toolbar.

Data selection

Facilitates the interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.

Scale

Specifies the scale type - linear or logarithmic.

Reversed Range

Reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.

Results & Graphs > Graphs > Colormap

Provides a graphical representation of data where the individual values contained in a two-dimensional matrix are represented as colors from selected color gradient map. This graph does not support a grouped source table.

Settings of each graph tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Colors

Defines the used palette and default background color for missing values.

Annotations

Specifies whether the labels are shown or not.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

X Axis, Y Axis, Color

Select default columns and enable interactive change in the graph top bar.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Autoscale

Scales graph by all data in the accumulated table.

Show button

Adds the Scale to fit the data button to the top toolbar.

Data selection

Facilitates the interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Results & Graphs > Graphs > Fitplot

This graph is used for visualizing fitted curve.

Settings of each graph tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Legend

Determines the visibility and the position of the graph legend.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Columns with Fitted Equation

This tab is used for selecting fitted equations to plot. Select a data variable and click on the arrow to assign it to Displayed Columns. Multiple variables can be assigned. To move the variable from the Displayed Columns list back to the Columns with Fitted Equation list, click or to remove all.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Data selection

Facilitates the interactive data selection in the graph scene.

Error bar button visible

Adds the Error bars visible button to the top toolbar.

Legend button visible

Adds the Legend visible button to the top toolbar.

Tools

Adds interactive tools to the graph side bar.

Results & Graphs > Graphs > Histogram

This graph is used for visualizing distribution of data.

Settings of each graph tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Bins

For numerical values set the bin count, eventually you can set the minimum and maximum. For string values enter the list used as a filter.

Data

All Columns

This tab is used to select data to plot. Select a data variable and click on the arrow to assign it to Displayed Columns. Multiple variables can be assigned. To move the variable from the Displayed Columns list back to the Columns with Fitted Equation list, click or to remove all.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Tools

Adds interactive tools to the graph side bar.

Results & Graphs > Graphs > Linechart

This graph is used for visualizing Y as function of X.

Settings of each graph tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Palettes & Markers

Defines palettes and markers and grouped source table behavior.

Annotations

Specifies whether the X and Y data labels are shown.

Legend

Determines the visibility and the position of the graph legend.

Data

All Columns

This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes. To move the variable from the axis list back to the All Columns list, click or to remove all. With a variable selected in the X/Y Axis list, Series style such as color and values. Error Bar section sets the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its Color, Line width, and Whisker width.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Autoscale

Scales graph by all data in the accumulated table.

Show button

Adds the Scale to fit the data button to the top toolbar.

Data selection

Facilitates the interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.

Scale

Specifies the scale type - linear or logarithmic.

Reversed Range

Reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.

Results & Graphs > Graphs > Scatterplot

This graph is used for visualizing a cloud of points.

Settings of each graph tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Palettes & Markers

Defines palettes and markers and grouped source table behavior.

Annotations

Specifies whether the X and Y data labels are shown.

Legend

Determines the visibility and the position of the graph legend.

Data

All Columns

This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes. To move the variable from the axis list back to the All Columns list, click or to remove all. With a variable selected in the X/Y Axis list, Series style such as color and values. Error Bar section sets the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its Color, Line width, and Whisker width.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Autoscale

Scales graph by all data in the accumulated table.

Show button

Adds the Scale to fit the data button to the top toolbar.

Data selection

Facilitates the interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.

Scale

Specifies the scale type - linear or logarithmic.

Reversed Range

Reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.

Results & Graphs > Graphs > Scatterplot 4D

This graph is used for visualizing a cloud of points. Points can differentiate by size and color.

Settings of each graph tab are described below:

General

Graph Title

Sets the title of the graph shown in the top.

Palettes & Markers

Defines palettes and markers and grouped source table behavior.

Annotations

Specifies whether the X and Y data labels are shown.

Legend

Determines the visibility and the position of the graph legend.

Data

X Axis, Y Axis, Color, Size

Select default columns and enable interactive change in graph top bar.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Autoscale

Scales graph by all data in the accumulated table.

Show button

Adds the Scale to fit the data button to the top toolbar.

Data selection

Facilitates the interactive data selection in the graph scene.

Tools

Adds interactive tools to the graph side bar.

Axes

Axis Label

Defines the visibility and text of the axis label.

Labels

Defines the format and display precision of the tick labels.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box.

Scale

Specifies the scale type - linear or logarithmic.

Reversed Range

Reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and grid lines is set automatically. If switched to Fixed, a major step value used for the ticks and grid lines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Checking Grid adds a grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Checking Grid adds a grid line.

Results & Graphs > Layout > Display

Specifies which results are displayed in the Main panel - View > Analysis Controls > GA3 Results - Main (Left, Right inputs), Side panel - View > Analysis Controls > GA3 Results - Side (Side input) or Report panel (Report input).

Results & Graphs > Layout > Horizontal

Organizes input result panes or layouts side-by-side horizontally.

Results & Graphs > Layout > Stacked

Organizes input result panes one over the other.

Results & Graphs > Wellplate > Bars

Displays well plate with one or more bars in each well. Any numerical column aggregated per well is suitable as input.

General

Graph Title

Sets the title of the graph shown in the top.

Data Range

Overrides the overall minimum/maximum.

Log Y

Displays the bars in a logarithmic scale.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Columns

Selects the features for the graph.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Selection visible

Enables the user to select the data columns.

Shown columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Data selection

Facilitates the interactive data selection in the graph scene.

Results & Graphs > Wellplate > Barstack

Displays well plate with bars stacked one over the other in each well. Any numerical column aggregated per well is suitable as input.

General

Graph Title

Sets the title of the graph shown in the top.

Data Range

Overrides the overall minimum/maximum.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Columns

Selects the features for the graph.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Selection visible

Enables the user to select the data columns.

Shown columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Data selection

Facilitates the interactive data selection in the graph scene.

Results & Graphs > Wellplate > Boxplot

Displays the well plate with a box plot in each well. Any box plot aggregated column per well is suitable as input.

Table

Graph Title

Sets the title of the graph shown in the top.

Data Range

Overrides the overall minimum/maximum.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Columns

Selects the features for the graph.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Selection visible

Enables the user to select the data columns.

Shown columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Data selection

Facilitates the interactive data selection in the graph scene.

Results & Graphs > Wellplate > Dosing

Displays the well plate with dosing information: concentrations and positive/negative controls. It uses concentration, compound, group and control columns from a table typically produced by the Measurement > Metadata > Wellplate node.

General

Graph Title

Sets the title of the graph shown in the top.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Results & Graphs > Wellplate > Heatmap

Displays the well plate heat map. Any numerical aggregated column per well is suitable as input.

General

Graph Title

Sets the title of the graph shown in the top.

Data Range

Overrides the overall minimum/maximum.

Log colors

Shows color in a logarithmic scale.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Columns

Selects the features for the graph.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Selection visible

Enables the user to select the data columns.

Shown columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Results & Graphs > Wellplate > Image

Displays the well plate with image and optionally binary overlay thumbnails. Any image thumbnail column is suitable. The thumbnail is typically produced by the Measurement > Metadata > Wellplate node.

General

Graph Title

Sets the title of the graph shown in the top.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Selections visible

Enables the user to select color channels and/or binary layers.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to the relevant frame).

Results & Graphs > Wellplate > Labeling

Displays the well plate with labeling information: positive/negative controls, detection and custom labels. Uses detection and labeling columns from a table typically produced by the Measurement > Metadata > Wellplate node.

General

Graph Title

Sets the title of the graph shown in the top.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Selections visible

Enables the user to select color channels and/or binary layers.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to the relevant frame).

Results & Graphs > Wellplate > Linechart

Displays the well plate with a chart visualizing Y as a function of X.

General

Graph Title

Sets the title of the graph shown in the top.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

X-axis column

Select data for the x axis column.

Y-axis column

Select data for the y axis column.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to the relevant frame).

Results & Graphs > Wellplate > Violin

Displays the well plate with violin plot in each well. Any violin aggregated column per well is suitable as input.

General

Graph Title

Sets the title of the graph shown in the top.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Columns

Selects the features for the graph.

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Column Selection

Select which columns can be interactively selected in graph top toolbar for each axis.

Selections visible

Enables the user to select color channels and/or binary layers.

Shown columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to the relevant frame).

Results & Graphs > Tables > Summary

Table view for showing summary information in the form of two columns: header and value. The input to the summary table is a table which gets transposed in such a way that the column names become header and the first row values become values.

Data

Display Data

Data to be displayed.

Shown columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Sections

Sections define the first rows of sections. Section is separated visually by an extra space.

Header suffix

Header suffix for all headers (e.g. :).

Interaction

Name

Defines the graph name in the layouts.

Icon

Defines the graph icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Results & Graphs > Tables > Table

Table view for showing the data. Table columns can be resized, sorted, moved, filtered if enabled in the node. Statistics can be enabled as well.

General

Table Title

Sets the title of the table shown in the top.

Show row index column

Show row index column in front of each row.

Enable sorting

Enable sorting on all columns.

Enable resizing

Enable resizing on all columns.

Enable moving

Enable moving on all columns.

Enable filtering

Enable filtering on all columns.

Data

Display Data

Selects what data should be displayed (All data, Current frame, ...), i.e. the default value.

Shown columns

Shown columns to force visible. The text is regular pattern that must match. Show takes precedence over hide.

Hidden columns

Hidden columns to force not visible. The text is regular pattern that must match. Use * to select all columns in conjunction with show.

Interaction

Tab Title

Sets the title of the table shown in the top.

Tab Icon

Defines the tab icon in the layouts.

Display Data Selection

Allows the user to change the set Display Data directly in the chart (a drop-down menu appears at the top if something was checked). When having multiple charts/tables in the layout, they can Synchronize with each other. Select the current frame for a table and the next chart will also show only data from the current frame.

Statistics

Selects the statistics rows to be calculated.

Data selection

Data selection enables the user to select a row with a link into the image (selects objects or moves to the relevant frame).

Results & Graphs > Tables > Table with Stats

This node works like node Results & Graphs > Tables > Table, but you need to connect a table with measured statistics to it (e.g. from the Statistics node).

Results & Graphs > Tables > Object Catalog

Creates a catalog of objects. The node has to be connected to the ND Processing & Conversions > Render to Table > Render Objects node.

Results & Graphs > Reports > Report

Puts the connected results into a report which is defined in this node and shown in the Analysis Results tab. For details about defining the report, please see Report Editing.

Results & Graphs > Reports > HTML Report

Creates report as HTML document using Markdown template (MD), Python code and optional CSS.

Note

Currently the node is lacking interactive editing aids and this documentation is rudimentary. Therefore it should be used by advanced users only.

The report connects to one or more table inputs (including layouts).

The MD template contains Markdown (may contain HTML) for static content and more or less sections enclosed in {{ }} which are replaced by dynamic content.

For every {{ arg0, ..., argN, kwarg0=value0, ..., kwargM=valueM }} section printToHtml(arg0, ..., argN, kwarg0=value0, ..., kwargM=valueM) is called.

By default it calls the limreport.defaultPrintToHtml() but can be overridden.

Typically arg0 is the name of the input a for A, b for B etc. If the input is a layout the arg1 should be the pane index counting from the left. Remaining parameters depends on the type of the input (graph, wellplate, table, summary).

Examples of MD template:

  1. Display name of the experiment into the heading (#), a is a layout, 0 is the first pane (summary), 'Experiment name' is column name:

  2. Display dosing and labeling side-by-side, b is layout 1 is labeling pane and 2 is dosing pane (image at the top).

  3. Display all available features Dose response fit, a is layout 2 is fit plot pane, cycle will cycle over all available features.

  4. Displaying a table, a is layout, 2 is table pane, number of rowHeaderCols=1 and custom table html style.

  5. Displaying small thumbnails, d is a table generated using ND Processing & Conversions > Render to Table > Render Frame node.

    Below is the default python which can be used as it is.

    import importlib
    import limreport, limhtml
    
    # useful for development
    importlib.reload(limreport)
    importlib.reload(limhtml)
    
    # called for every {{ ... }} in MD
    def printToHtml(*args, **kwargs):
        return limreport.defaultPrintToHtml(*args, **kwargs)
    
    # if present called on final HTML 
    def processHtml(html):
        # chromio v.83 doesn't support break-after, break-before: avoid-page
        # wrap <hN></hN><element></element> into:
        # <div class="lim-no-page-break-inside"><hN></hN><element></element></div>
        parser = limhtml.AvoidPageBreaks()
        parser.feed(html)
        return parser.output()

    For further info see the following files:

    C:\Program Files\NIS Elements\Python\Lib\site-packages\limhtml.py
    C:\Program Files\NIS Elements\Python\Lib\site-packages\limreport.py
    C:\Program Files\NIS Elements\Python\Lib\site-packages\limtabledata.py
Results & Graphs > Legacy Graphs > Barchart

This graph is used for visualizing Y of ordinal X. Settings of each tab are described below.

General

Title

Sets the title of the graph shown in the top.

Inside

Sets the inside color of the graph (color behind the visualized data).

Outside

Sets the outside color of the graph (frame around the visualized data).

Default Dark

Returns the colors to the default dark scheme.

Axes

Sets the color of the axes.

Text

Sets the color of the texts.

Default Light

Returns the colors to the default light scheme.

Series

Sets the color scheme for the grouped data.

Display Values

Shows data values directly in the graph.

Hidden

Hides the legend.

Inside Graph

Shows the legend inside the graph. Choose the legend position in the drop-down menu next to this option.

Below Graph

Shows the legend below the graph.

Background

Sets the background color of the legend.

Text

Sets the color of the legend text.

Data

All Columns

This tab is used to pair the graph axes with the variables available in the table input. Select a data variable and click on the arrow next to the selected axis to assign it to this axis. Multiple variables can be assigned to the Y axes.

button opens the Data Series dialog setting up the data series graph properties such as the color, line type, stroke type, line width, fill, marker type, and values type. Only the checked properties are visualized in the graph.

button opens the Error Bar dialog setting up the error bar properties for the selected column. Choose an error column from the drop-down menu and optionally set its color, line width, and whisker width.

buttons move the variable in the axis list up/down.

button moves the variable from the axis list back to the All Columns list.

X Axis/Y Axis/Left Y Axis/Right Y Axis/Color Axis/Size Axis/Category Axis

Title

Sets the title of the axis that is currently being set.

Reversed Range

Reverses the range of the category axis.

Visible

Shows/hides the labels for the axis currently being set.

Format

Specifies the axis label format for the axis currently being set.

Precision

Specifies the axis label numeral precision.

Step

Specifies the step size of the category axis.

Minimum

In Auto mode, the minimal value for the range is set automatically. If switched to Fixed, a minimal value from which the data are visualized can be entered into the edit box. Scale specifies the scale type - linear or logarithmic.

Maximum

In Auto mode, the maximal value for the range is set automatically. If switched to Fixed, a maximal value to which the data are visualized can be entered into the edit box. Reversed Range reverses the values range from min - max to max -min.

Major Step

In Auto mode, the major step value for the ticks and gridlines is set automatically. If switched to Fixed, a major step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each major step value. Grid color specifies the color of the grid line.

Minor Step

In Auto mode, the minor step value for the ticks and gridlines is set automatically. If switched to Fixed, a minor step value used for the ticks and gridlines visualization can be entered into the edit box. If Tick is checked, a short tick is added to the axis next to each minor step value. Grid color specifies the color of the grid line.

Results & Graphs > Legacy Graphs > Colormap

Provides a graphical representation of data where the individual values contained in a two-dimensional matrix are represented as colors from selected color gradient map. This graph does not support grouped source table A.

All tabs are closely described in the Results > Graphs > Barchart node.

Typical Usecases

  • Heatmap of a property related to grid type patterns (wellplate) where x, y axes are mapped into columns and rows.

  • Tracking results with fixed number of tracks and time points can color code speed or other track properties at given time.

Results & Graphs > Legacy Graphs > Linechart

This graph is used for visualizing Y as function of X.

All tabs are closely described in the Results > Graphs > Barchart node.

Results & Graphs > Legacy Graphs > Scatterplot

This graph is used for visualizing a cloud of points. If the source table A is grouped the graph shows them in colors.

All tabs are closely described in the Results > Graphs > Barchart node.

Results & Graphs > Legacy Graphs > Scatterplot XY Color

This 3D graph is used for visualizing a cloud of points. The third axis is visualized using a color gradient. This graph does not support grouped source table A.

All tabs are closely described in the Results > Graphs > Barchart node.

Results & Graphs > Legacy Graphs > Scatterplot XY Size

This 3D graph is used for visualizing a cloud of points. The third axis is visualized using disks of different size. This graph does not support grouped source table A.

All tabs are closely described in the Results > Graphs > Barchart node.

Results & Graphs > Legacy Graphs > Statistical Box

Depicts groups of numerical data through their quartiles as a box plot. It shows minimum, first quartile, mean, third quartile and maximum. It can optionally show outliers. If the source table A is grouped the graph shows one box for each group.

All tabs are closely described in the Results > Graphs > Barchart node.