Capturing FRET Image, FRET Calibration

Run the Applications > Ratio, Ca2+, FRET > Capture FRET Image command to display the main FRET control panel. Select the appropriate settings and capture the FRET image by the Capture FRET button.

Hardware Setup

The FRET control panel consists of several sections. In this section, optical configurations which will be used during the acquisition should be assigned to FRET channels.

Optical Configuration

In this pull-down menu, select an optical configuration that contains Camera settings which shall be used during the FRET image acquisition. If None is selected, the current camera settings will be used.

Channels

The FRET image can contain 2-4 channels. Here you can assign an optical configuration to each of them. It is recommended that the optical configuration contains only the filter changer settings.

Note

If the Dual View device is available, it can be used for channel splitting. Then, only one optical configuration for each excitation wavelength will be used. The Dual View device splits the emitted light to two beams filtering different wavelengths, and each of them is captured by only a half of the camera chip.

Dual camera setup is also possible, splitting the different wavelengths between two cameras.

Load/Save

The channels settings may be saved to the system by the Save button. Once saved under some user defined name, this name appears in the Load pull-down menu ready to be loaded. The settings can also be loaded from an external FRET image.

FRET Calibration

Separate images of the D-labeled and the A-labeled samples must be acquired in order to calibrate the FRET method correctly.

  1. Insert the D-labeled sample. Press the Capture Donor Only Sample button.

  2. A new image will be captured and named Donor.

  3. Insert the A-labeled sample. Press the Capture Acceptor Only Sample button.

  4. A new image will be captured and named Acceptor.

  5. Press the Calibrate button to display the calibration dialog.

  6. Select the Donor image and the Acceptor image in the appropriate pull-down menus.

  7. The Define ROI and the Define Background ROI buttons distinguish the foreground/background parts of the images.

  8. Draw the background/foreground ROIs.

  9. Confirm the calibration by OK.

Note

Any image file can be used for the calibration. The pull down menu displays the currently opened images. Other images can be reached via the Browse button. If a non-FRET image is used, a window appears where you should map the image channels to FRET channels and select the FRET method.

FRET Method

In this section, select one of the two available FRET methods, Sensitized Emission or Specified bleed through.

Xx FRET

Average intensities of assigned FRET image components.

Xx DONOR/ACCEPTOR

Average intensities of the donor/acceptor-only images.

FRETEFFICIENCY

is calculated by the following formula:

EFFICIENCY [%] = (FRETCORRECTED / DdFRET ) * 100


FRET coefficients

There can be 2 or 4 coefficients used according to the method. Their values are results of the calibration. If the calibration was not performed, you can type the coefficient values manually. The coefficients settings can be saved/loaded.

Acceptor in FRET (CoA)

DaACCEPTOR / AaACCEPTOR

Donor in FRET (CoB)

DaDONOR / DdDONOR

Donor in Acceptor

DdACCEPTOR / AaACCEPTOR

Acceptor in Donor

AaDONOR / DdDONOR